TabixInput {Rsamtools} | R Documentation |
Scan compressed, sorted, tabix-indexed, tab-delimited files.
scanTabix(file, ..., param) ## S4 method for signature 'character,RangesList' scanTabix(file, ..., param) ## S4 method for signature 'character,RangedData' scanTabix(file, ..., param) ## S4 method for signature 'character,GRanges' scanTabix(file, ..., param)
file |
The character() file name(s) of the tabix file be
processed, or more flexibly an instance of class
|
param |
A instance of |
... |
Additional arguments, currently ignored. |
scanTabix
returns a list, with one element per region. Each element
of the list is a character vector representing records in the region.
Martin Morgan <mtmorgan@fhcrc.org>.
http://samtools.sourceforge.net/tabix.shtml
example(TabixFile)