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Classes
Identification

Protein and peptide identification classes. More...

Classes

class  CompNovoIdentification
 run with CompNovoIdentification More...
 
class  CompNovoIdentificationBase::Permut
 Simple class to store permutations and a score. More...
 
class  CompNovoIdentificationBase
 run with CompNovoIdentificationBase More...
 
class  CompNovoIdentificationCID
 run with CompNovoIdentificationCID More...
 
struct  AccurateMassSearchEngine::MappingEntry_
 
struct  AccurateMassSearchEngine::CompareEntryAndMass_
 
class  AccurateMassSearchEngine
 An algorithm to search for exact mass matches from a spectrum against a database (e.g. HMDB). More...
 
class  ConsensusID
 Calculates a consensus ID from several ID runs. More...
 
class  FalseDiscoveryRate
 Calculates an FDR from identifications. More...
 
struct  IDDecoyProbability::Transformation_
 struct to be used to store a transformation (used for fitting) More...
 
class  IDDecoyProbability
 IDDecoyProbability calculates probabilities using decoy approach. More...
 
class  IDRipper
 Ripping protein/peptide identification according their file origin. More...
 
class  PILISIdentification
 This class actually implements a complete ProteinIdentification run with PILIS. More...
 
class  PILISModel
 This class implements the simulation of the spectra from PILIS. More...
 
class  PILISNeutralLossModel
 This class implements the simulation of the spectra from PILIS. More...
 
class  PILISScoring
 This class actually implements the E-value based scoring of PILIS. More...
 

Detailed Description

Protein and peptide identification classes.


OpenMS / TOPP release 2.0.0 Documentation generated on Sat May 16 2015 16:13:43 using doxygen 1.8.9.1