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Product Class Reference

Product meta information. More...

#include <OpenMS/METADATA/Product.h>

Inheritance diagram for Product:
CVTermList MetaInfoInterface

Public Member Functions

 Product ()
 Constructor. More...
 
 Product (const Product &source)
 Copy constructor. More...
 
 ~Product ()
 Destructor. More...
 
Productoperator= (const Product &source)
 Assignment operator. More...
 
bool operator== (const Product &rhs) const
 Equality operator. More...
 
bool operator!= (const Product &rhs) const
 Equality operator. More...
 
double getMZ () const
 returns the target m/z More...
 
void setMZ (double mz)
 sets the target m/z More...
 
double getIsolationWindowLowerOffset () const
 returns the lower offset from the target m/z More...
 
void setIsolationWindowLowerOffset (double bound)
 sets the lower offset from the target m/z More...
 
double getIsolationWindowUpperOffset () const
 returns the upper offset from the target m/z More...
 
void setIsolationWindowUpperOffset (double bound)
 sets the upper offset from the target m/z More...
 
- Public Member Functions inherited from CVTermList
 CVTermList ()
 Defaults constructor. More...
 
 CVTermList (const CVTermList &rhs)
 Copy constructor. More...
 
virtual ~CVTermList ()
 Destructor. More...
 
CVTermListoperator= (const CVTermList &rhs)
 Assignment operator. More...
 
void setCVTerms (const std::vector< CVTerm > &terms)
 sets the CV terms More...
 
void replaceCVTerm (const CVTerm &cv_term)
 replaces the specified CV term More...
 
void replaceCVTerms (const std::vector< CVTerm > &cv_terms, const String &accession)
 replaces the specified CV terms using the given accession number More...
 
void replaceCVTerms (const Map< String, std::vector< CVTerm > > &cv_term_map)
 replaces all cv terms with a map (can be obtained via getCVTerms) More...
 
void consumeCVTerms (const Map< String, std::vector< CVTerm > > &cv_term_map)
 merges the given map into the member map, no duplicate checking More...
 
const Map< String, std::vector< CVTerm > > & getCVTerms () const
 returns the accession string of the term More...
 
void addCVTerm (const CVTerm &term)
 adds a CV term More...
 
bool operator== (const CVTermList &cv_term_list) const
 equality operator More...
 
bool operator!= (const CVTermList &cv_term_list) const
 inequality operator More...
 
bool hasCVTerm (const String &accession) const
 checks whether the term has a value More...
 
bool empty () const
 return true if no terms are available More...
 
- Public Member Functions inherited from MetaInfoInterface
 MetaInfoInterface ()
 constructor More...
 
 MetaInfoInterface (const MetaInfoInterface &rhs)
 copy constructor More...
 
 ~MetaInfoInterface ()
 destructor More...
 
MetaInfoInterfaceoperator= (const MetaInfoInterface &rhs)
 assignment operator More...
 
bool operator== (const MetaInfoInterface &rhs) const
 Equality operator. More...
 
bool operator!= (const MetaInfoInterface &rhs) const
 Equality operator. More...
 
const DataValuegetMetaValue (const String &name) const
 returns the value corresponding to a string More...
 
const DataValuegetMetaValue (UInt index) const
 returns the value corresponding to an index More...
 
bool metaValueExists (const String &name) const
 returns if this MetaInfo is set More...
 
bool metaValueExists (UInt index) const
 returns if this MetaInfo is set More...
 
void setMetaValue (const String &name, const DataValue &value)
 sets the DataValue corresponding to a name More...
 
void setMetaValue (UInt index, const DataValue &value)
 sets the DataValue corresponding to an index More...
 
void removeMetaValue (const String &name)
 Removes the DataValue corresponding to name if it exists. More...
 
void removeMetaValue (UInt index)
 Removes the DataValue corresponding to index if it exists. More...
 
void getKeys (std::vector< String > &keys) const
 fills the given vector with a list of all keys for which a value is set More...
 
void getKeys (std::vector< UInt > &keys) const
 fills the given vector with a list of all keys for which a value is set More...
 
bool isMetaEmpty () const
 returns if the MetaInfo is empty More...
 
void clearMetaInfo ()
 removes all meta values More...
 

Protected Attributes

double mz_
 
double window_low_
 
double window_up_
 
- Protected Attributes inherited from CVTermList
Map< String, std::vector< CVTerm > > cv_terms_
 
- Protected Attributes inherited from MetaInfoInterface
MetaInfometa_
 pointer to the MetaInfo object. 0 by default More...
 

Additional Inherited Members

- Static Public Member Functions inherited from MetaInfoInterface
static MetaInfoRegistrymetaRegistry ()
 returns a reference to the MetaInfoRegistry More...
 
- Protected Member Functions inherited from MetaInfoInterface
void createIfNotExists_ ()
 creates the MetaInfo object if it does not exist More...
 

Detailed Description

Product meta information.

This class describes the product isolation window for special scan types, such as MRM.

Constructor & Destructor Documentation

Product ( )

Constructor.

Product ( const Product source)

Copy constructor.

~Product ( )

Destructor.

Member Function Documentation

double getIsolationWindowLowerOffset ( ) const

returns the lower offset from the target m/z

Referenced by MzMLHandler< MapType >::writeProduct_().

double getIsolationWindowUpperOffset ( ) const

returns the upper offset from the target m/z

Referenced by MzMLHandler< MapType >::writeProduct_().

double getMZ ( ) const
bool operator!= ( const Product rhs) const

Equality operator.

Product& operator= ( const Product source)

Assignment operator.

bool operator== ( const Product rhs) const

Equality operator.

void setIsolationWindowLowerOffset ( double  bound)

sets the lower offset from the target m/z

void setIsolationWindowUpperOffset ( double  bound)

sets the upper offset from the target m/z

void setMZ ( double  mz)

Member Data Documentation

double mz_
protected
double window_low_
protected
double window_up_
protected

OpenMS / TOPP release 2.0.0 Documentation generated on Sat May 16 2015 16:14:02 using doxygen 1.8.9.1