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t_star_ :
LinearRegression
tab_bar_ :
TOPPASBase
,
TOPPViewBase
tab_width_ :
FuzzyStringComparator
table_steps_ :
IsotopeWavelet
table_widget_ :
SpectraIdentificationViewWidget
tableRows :
QcMLFile::Attachment
tag_ :
CVMappingFile
,
MascotXMLHandler
,
MzIdentMLHandler
,
MzQuantMLHandler
,
PTMXMLHandler
,
ToolDescriptionHandler
,
TraMLHandler
,
UnimodXMLHandler
,
XTandemInfileXMLHandler
,
OMSSAXMLFile
,
QcMLFile
,
XTandemXMLFile
tag_count_ :
InspectInfile
TAG_CV :
MzIdentMLDOMHandler
TAG_root :
MzIdentMLDOMHandler
taggingmass_shift_ :
TaggingVisualizer
taggingvariant_ :
TaggingVisualizer
tags :
ParamXMLHandler
,
Param::ParamEntry
,
ParameterInformation
tags_ :
SuffixArraySeqan
,
SuffixArrayTrypticCompressed
tags_open_ :
MascotXMLHandler
target :
FileMapping
,
LogStreamBuf::StreamStruct
target_ :
ListUtils::DoubleTolerancePredicate_
target_in_param_ :
TOPPASEdge
target_input_param_indices_ :
TOPPASIOMappingDialog
targetMzXML :
FTPeakDetectController
targets_ :
TargetedExperiment
tau_ :
EGHFitter1D
,
EGHModel
,
EGHTraceFitter
taxid :
MzTabProteinSectionRow
,
MzTabSmallMoleculeSectionRow
taxon_ :
XTandemInfile
taxonomy :
ProteinIdentification::SearchParameters
taxonomy_ :
MascotInfile
,
ProteinIdentificationVisualizer
taxonomy_file_ :
XTandemInfile
td_ :
AcqusHandler
,
ToolDescriptionHandler
td_vec_ :
ToolDescriptionHandler
tde_ :
ToolDescriptionHandler
technical_rng_ :
SimRandomNumberGenerator
temp_ :
BaseVisualizer< ObjectType >
temperature_ :
Digestion
,
HPLC
temporary_annotations_ :
TOPPViewIdentificationViewBehavior
term_name_ :
CVMappingTerm
term_spec_ :
ModificationDefinition
,
ResidueModification
term_specs_ :
UnimodXMLHandler
terminus :
PepXMLFile::AminoAcidModification
terms_ :
ControlledVocabulary
test_mode_ :
TOPPBase
text_ :
Annotation1DItem
text_fail :
ToolExternalDetails
text_finish :
ToolExternalDetails
text_startup :
ToolExternalDetails
th_ :
BernNorm
THEO_MZ :
MS2Info
theoretical_int :
FeatureFinderAlgorithmPickedHelperStructs::MassTrace
theoretical_mz :
FeatureFinderAlgorithmPickedHelperStructs::IsotopePattern
theoretical_mz_ :
AccurateMassSearchResult
theoretical_pattern :
FeatureFinderAlgorithmPickedHelperStructs::IsotopePattern
THREADED_RANDOM_NUMBER_POOL_SIZE_ :
RawMSSignalSimulation
threaded_random_numbers_ :
RawMSSignalSimulation
threaded_random_numbers_index_ :
RawMSSignalSimulation
threads_active_ :
TOPPASScene
three_letter_code_ :
Residue
thresh_p_ :
MassExplainer
threshold_ :
ClusterHierarchical
,
MapAlignmentAlgorithmSpectrumAlignment
,
ThresholdMower
threshold_cvs :
MzIdentMLDOMHandler::SpectrumIdentificationProtocol
threshold_ups :
MzIdentMLDOMHandler::SpectrumIdentificationProtocol
tick_level_ :
AxisWidget
ticks_ :
Annotation1DDistanceItem
time_limit :
LPWrapper::SolverParam
timeout_ :
MascotRemoteQuery
timepoint_vali_ :
GradientVisualizer
timepoints_ :
GradientVisualizer
timer :
TOPPViewBase
timers_ :
FileWatcher
times_ :
Gradient
timestamp :
LogStreamBuf::LogCacheStruct
tissue :
MzTabSampleMetaData
title :
MzTabMetaData
tmp_boxes_ :
IsotopeWaveletTransform< PeakType >
tmp_path_ :
TOPPASBase
,
TOPPASScene
,
TOPPASToolVertex
to_ :
MascotRemoteQuery
,
TOPPASEdge
TOF_ :
MassAnalyzerVisualizer
TOF_total_path_length_ :
MassAnalyzer
tol_ :
EdwardsLippertIterator
,
FloatsWithTolLess
,
SuffixArraySeqan
,
SuffixArrayTrypticCompressed
tolerance :
EqualInTolerance< CompareType >
tolerance_ :
ListUtils::DoubleTolerancePredicate_
tolerance_mz_ :
TwoDOptimization
tolerance_stdev_box_ :
Fitter1D
toleranceMZ_ :
SuperHirnParameters
too_few_peptides :
PeptideAndProteinQuant::Statistics
tool :
TOPPViewBase
tool_bar_ :
IDEvaluationBase
,
TOPPASBase
,
TOPPViewBase
tool_bar_1d_ :
TOPPViewBase
tool_bar_2d_cons_ :
TOPPViewBase
tool_bar_2d_feat_ :
TOPPViewBase
tool_bar_2d_ident_ :
TOPPViewBase
tool_bar_2d_peak_ :
TOPPViewBase
tool_desc_ :
ToolsDialog
tool_description_ :
TOPPBase
tool_name_ :
TOPPASToolConfigDialog
,
TOPPBase
tool_ready_ :
TOPPASToolVertex
tool_type_ :
TOPPASToolConfigDialog
toolname_ :
DocumentIDTagger
tools_combo_ :
ToolsDialog
tools_external_ :
ToolHandler
tools_external_loaded_ :
ToolHandler
tools_internal_ :
ToolHandler
tools_internal_loaded_ :
ToolHandler
tools_tree_view_ :
TOPPASBase
topo_nr_ :
TOPPASVertex
topo_sort_marked_ :
TOPPASVertex
topp_ :
TOPPViewBase
topp_ini_file_ :
TOPPBase
topp_processes_queue_ :
TOPPASScene
total_abundances :
PeptideAndProteinQuant::PeptideData
,
PeptideAndProteinQuant::ProteinData
total_features :
PeptideAndProteinQuant::Statistics
total_gradient_time_ :
RTSimulation
total_intensity_ :
FeatureFindingMetabo
total_nr_peaks :
TwoDOptimization::Data
total_peak_area :
SHFeature
total_peptides :
PeptideAndProteinQuant::Statistics
total_size_ :
MSExperiment< PeakT, ChromatogramPeakT >
total_weight_reciprocal_ :
FeatureDistance
total_xic :
OpenSwath_Scores
TR :
MS1Signal
,
MS2ConsensusSpectrum
,
MS2Fragment
,
MS2Info
,
MSPeak
,
SHFeature
tr_ :
CentroidPeak
TR_APEX :
SHFeature
TR_END :
SHFeature
tr_gr_id_ :
MRMTransitionGroup< SpectrumType, TransitionType >
TR_START :
SHFeature
tr_table :
ToolExternalDetails
trace_ :
Param::ParamIterator
trace_peaks_ :
MassTrace
trace_termination_criterion_ :
MassTraceDetection
trace_termination_outliers_ :
MassTraceDetection
trace_tolerance_ :
FeatureFinderAlgorithmPicked
traces_ptr :
TraceFitter::ModelData
trafo_ :
InternalCalibration
train_count_trans_all_ :
HiddenMarkovModel
train_emission_prob_ :
HiddenMarkovModel
trained_trans_ :
HiddenMarkovModel
training_data_ :
SVMWrapper
training_problem_ :
SVMWrapper
training_set_ :
SVMWrapper
training_steps_count_ :
HiddenMarkovModel
trans_ :
HiddenMarkovModel
trans_intens_ :
IsotopeWaveletTransform< PeakType >::TransSpectrum
trans_x_ :
Spectrum3DOpenGLCanvas
trans_y_ :
Spectrum3DOpenGLCanvas
transition_map_ :
ConfidenceScoring
,
MRMTransitionGroup< SpectrumType, TransitionType >
transition_name :
TransitionTSVReader::TSVTransition
,
LightTransition
transitions :
LightTargetedExperiment
,
Peptide
transitions_ :
MRMTransitionGroup< SpectrumType, TransitionType >
,
TargetedExperiment
traversed :
ProteinResolver::PeptideEntry
,
ProteinResolver::ProteinEntry
trCoord_ :
BackgroundIntensityBin
treatmentcomment_ :
DigestionVisualizer
,
ModificationVisualizer
,
TaggingVisualizer
treatments_ :
Sample
treatmenttype_ :
DigestionVisualizer
,
ModificationVisualizer
,
TaggingVisualizer
tree_ :
ParamEditor
tree_id_ :
PeptideIdentificationVisualizer
,
ProteinIdentificationVisualizer
treeview_ :
MetaDataBrowser
trEnd :
MS2Fragment
trgroup_ :
TransitionGroupOpenMS< SpectrumT, TransitionT >
trie_db_pos_length_ :
InspectOutfile
trie_delimiter_ :
InspectOutfile
trim_right_cutoff_ :
ExtendedIsotopeModel
,
IsotopeModel
trimmed_left :
FeatureFinderAlgorithmPickedHelperStructs::TheoreticalIsotopePattern
trStart :
MS2Fragment
trTol_ :
SuperHirnParameters
tryptic_only_ :
CompNovoIdentificationBase
tsg_ :
PILISModel
tv :
TOPPASScene::TOPPProcess
tv_ :
TOPPViewIdentificationViewBehavior
,
TOPPViewSpectraViewBehavior
two_d_optimization_ :
PeakPickerCWT
type :
ParamXMLHandler
,
LayerData
,
ParameterInformation
,
PeakShape
,
PILISCrossValidation::Option
,
TOPPASToolVertex::IOInfo
type_ :
ChromatogramSettings
,
ListEditorDelegate
,
ListTable
,
IonDetector
,
IonDetectorVisualizer
,
ListEditor
,
MassAnalyzer
,
MassAnalyzerVisualizer
,
PrecursorIonSelection
,
ProgressLogger
,
SampleTreatment
,
SpectrumSettings
,
SpectrumSettingsVisualizer
,
TOPPASToolVertex
typeName_ :
ListEditorDelegate
types :
ToolDescriptionInternal
OpenMS / TOPP release 2.0.0
Documentation generated on Sat May 16 2015 16:15:42 using doxygen 1.8.9.1