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OpenSwathScoring Member List

This is the complete list of members for OpenSwathScoring, including all inherited members.

add_up_spectra_OpenSwathScoringprivate
calculateChromatographicScores(OpenSwath::IMRMFeature *imrmfeature, const std::vector< std::string > &native_ids, const std::vector< double > &normalized_library_intensity, std::vector< OpenSwath::ISignalToNoisePtr > &signal_noise_estimators, OpenSwath_Scores &scores)OpenSwathScoring
calculateDIAScores(OpenSwath::IMRMFeature *imrmfeature, const std::vector< TransitionType > &transitions, OpenSwath::SpectrumAccessPtr swath_map, OpenSwath::SpectrumAccessPtr ms1_map, OpenMS::DIAScoring &diascoring, const PeptideType &pep, OpenSwath_Scores &scores)OpenSwathScoring
calculateLibraryScores(OpenSwath::IMRMFeature *imrmfeature, const std::vector< TransitionType > &transitions, const PeptideType &pep, const double normalized_feature_rt, OpenSwath_Scores &scores)OpenSwathScoring
getAddedSpectra_(OpenSwath::SpectrumAccessPtr swath_map, double RT, int nr_spectra_to_add)OpenSwathScoring
getNormalized_library_intensities_(const std::vector< TransitionType > &transitions, std::vector< double > &normalized_library_intensity)OpenSwathScoring
initialize(double rt_normalization_factor, int add_up_spectra, double spacing_for_spectra_resampling, OpenSwath_Scores_Usage &su)OpenSwathScoring
OpenSwathScoring()OpenSwathScoring
PeptideType typedefOpenSwathScoringprivate
rt_normalization_factor_OpenSwathScoringprivate
spacing_for_spectra_resampling_OpenSwathScoringprivate
su_OpenSwathScoringprivate
TransitionType typedefOpenSwathScoringprivate
~OpenSwathScoring()OpenSwathScoring

OpenMS / TOPP release 2.0.0 Documentation generated on Sat May 16 2015 16:14:00 using doxygen 1.8.9.1