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_
__init__() (nitime.analysis.base.BaseAnalyzer method)
(nitime.analysis.coherence.CoherenceAnalyzer method)
(nitime.analysis.coherence.MTCoherenceAnalyzer method)
(nitime.analysis.coherence.SeedCoherenceAnalyzer method)
(nitime.analysis.coherence.SparseCoherenceAnalyzer method)
(nitime.analysis.correlation.CorrelationAnalyzer method)
(nitime.analysis.correlation.SeedCorrelationAnalyzer method)
(nitime.analysis.event_related.EventRelatedAnalyzer method)
(nitime.analysis.granger.GrangerAnalyzer method)
(nitime.analysis.normalization.NormalizationAnalyzer method)
(nitime.analysis.snr.SNRAnalyzer method)
(nitime.analysis.spectral.FilterAnalyzer method)
(nitime.analysis.spectral.HilbertAnalyzer method)
(nitime.analysis.spectral.MorletWaveletAnalyzer method)
(nitime.analysis.spectral.SpectralAnalyzer method)
(nitime.descriptors.OneTimeProperty method)
(nitime.descriptors.ResetMixin method)
(nitime.lazyimports.LazyImport method)
(nitime.timeseries.Epochs method)
(nitime.timeseries.Events method)
(nitime.timeseries.Frequency method)
(nitime.timeseries.TimeArray method)
(nitime.timeseries.TimeInterface method)
(nitime.timeseries.TimeSeries method)
(nitime.timeseries.TimeSeriesBase method)
(nitime.timeseries.TimeSeriesInterface method)
(nitime.timeseries.UniformTime method)
A
adaptive_weights() (in module nitime.utils)
akaike_information_criterion() (in module nitime.utils)
amplitude() (nitime.analysis.spectral.HilbertAnalyzer method)
(nitime.analysis.spectral.MorletWaveletAnalyzer method)
analytic() (nitime.analysis.spectral.HilbertAnalyzer method)
(nitime.analysis.spectral.MorletWaveletAnalyzer method)
antisymm_rand_arr() (in module nitime.utils)
AR_est_LD() (in module nitime.algorithms.autoregressive)
AR_est_YW() (in module nitime.algorithms.autoregressive)
ar_generator() (in module nitime.utils)
AR_psd() (in module nitime.algorithms.autoregressive)
at() (nitime.timeseries.TimeArray method)
(nitime.timeseries.TimeSeries method)
(nitime.timeseries.UniformTime method)
auto_attr() (in module nitime.descriptors)
autocorr() (in module nitime.utils)
autocov() (in module nitime.utils)
(nitime.analysis.granger.GrangerAnalyzer method)
autocov_vector() (in module nitime.utils)
B
BaseAnalyzer (class in nitime.analysis.base)
bayesian_information_criterion() (in module nitime.utils)
boxcar_filter() (in module nitime.algorithms.filter)
C
cache() (nitime.analysis.coherence.SparseCoherenceAnalyzer method)
cache_fft() (in module nitime.algorithms.cohere)
cache_to_coherency() (in module nitime.algorithms.cohere)
cache_to_phase() (in module nitime.algorithms.cohere)
cache_to_psd() (in module nitime.algorithms.cohere)
cache_to_relative_phase() (in module nitime.algorithms.cohere)
causality_xy() (nitime.analysis.granger.GrangerAnalyzer method)
causality_yx() (nitime.analysis.granger.GrangerAnalyzer method)
circle_to_hz() (in module nitime.utils)
circularize() (in module nitime.utils)
coherence() (in module nitime.algorithms.cohere)
(nitime.analysis.coherence.CoherenceAnalyzer method)
(nitime.analysis.coherence.MTCoherenceAnalyzer method)
(nitime.analysis.coherence.SeedCoherenceAnalyzer method)
(nitime.analysis.coherence.SparseCoherenceAnalyzer method)
coherence_bavg() (in module nitime.algorithms.cohere)
coherence_from_spectral() (in module nitime.algorithms.autoregressive)
coherence_partial() (in module nitime.algorithms.cohere)
(nitime.analysis.coherence.CoherenceAnalyzer method)
coherence_partial_spec() (in module nitime.algorithms.cohere)
coherence_regularized() (in module nitime.algorithms.cohere)
coherence_spec() (in module nitime.algorithms.cohere)
CoherenceAnalyzer (class in nitime.analysis.coherence)
coherency() (in module nitime.algorithms.cohere)
(nitime.analysis.coherence.CoherenceAnalyzer method)
(nitime.analysis.coherence.SeedCoherenceAnalyzer method)
(nitime.analysis.coherence.SparseCoherenceAnalyzer method)
coherency_bavg() (in module nitime.algorithms.cohere)
coherency_phase_delay() (in module nitime.algorithms.cohere)
coherency_phase_spectrum() (in module nitime.algorithms.cohere)
coherency_regularized() (in module nitime.algorithms.cohere)
coherency_spec() (in module nitime.algorithms.cohere)
concatenate_time_series() (in module nitime.timeseries)
conditional_entropy() (in module nitime.algorithms.entropy)
confidence_interval() (nitime.analysis.coherence.MTCoherenceAnalyzer method)
convert_unit() (nitime.timeseries.TimeArray method)
copy() (nitime.timeseries.TimeSeries method)
corrcoef() (nitime.analysis.correlation.CorrelationAnalyzer method)
(nitime.analysis.correlation.SeedCorrelationAnalyzer method)
correlation() (nitime.analysis.snr.SNRAnalyzer method)
correlation_spectrum() (in module nitime.algorithms.cohere)
CorrelationAnalyzer (class in nitime.analysis.correlation)
cpsd() (nitime.analysis.spectral.SpectralAnalyzer method)
crosscorr() (in module nitime.utils)
crosscov() (in module nitime.utils)
crosscov_vector() (in module nitime.utils)
D
data (nitime.timeseries.TimeSeriesBase attribute)
(nitime.timeseries.TimeSeriesInterface attribute)
dB() (in module nitime.utils)
delay() (nitime.analysis.coherence.CoherenceAnalyzer method)
(nitime.analysis.coherence.SeedCoherenceAnalyzer method)
(nitime.analysis.coherence.SparseCoherenceAnalyzer method)
detect_lines() (in module nitime.utils)
df() (nitime.analysis.coherence.MTCoherenceAnalyzer method)
diag_indices() (in module nitime.utils)
diag_indices_from() (in module nitime.utils)
dpss_windows() (in module nitime.algorithms.spectral)
draw_arrows() (in module nitime.viz)
draw_graph() (in module nitime.viz)
draw_matrix() (in module nitime.viz)
draw_networkx_nodes() (in module nitime.viz)
drawgraph_channels() (in module nitime.viz)
drawmatrix_channels() (in module nitime.viz)
duration() (nitime.timeseries.Epochs method)
during() (nitime.timeseries.TimeArray method)
(nitime.timeseries.TimeSeries method)
(nitime.timeseries.UniformTime method)
E
eigs() (nitime.analysis.coherence.MTCoherenceAnalyzer method)
enabled() (in module nitime.lazy)
entropy() (in module nitime.algorithms.entropy)
entropy_cc() (in module nitime.algorithms.entropy)
Epochs (class in nitime.timeseries)
error_cov() (nitime.analysis.granger.GrangerAnalyzer method)
et_data() (nitime.analysis.event_related.EventRelatedAnalyzer method)
eta() (nitime.analysis.event_related.EventRelatedAnalyzer method)
ets() (nitime.analysis.event_related.EventRelatedAnalyzer method)
EventRelatedAnalyzer (class in nitime.analysis.event_related)
Events (class in nitime.timeseries)
expected_jk_variance() (in module nitime.utils)
F
fftconvolve() (in module nitime.utils)
fill_diagonal() (in module nitime.utils)
FilterAnalyzer (class in nitime.analysis.spectral)
filtered_boxcar() (nitime.analysis.spectral.FilterAnalyzer method)
filtered_fourier() (nitime.analysis.spectral.FilterAnalyzer method)
filtfilt() (nitime.analysis.spectral.FilterAnalyzer method)
fir() (in module nitime.algorithms.event_related)
FIR() (nitime.analysis.event_related.EventRelatedAnalyzer method)
fir() (nitime.analysis.spectral.FilterAnalyzer method)
fir_design_matrix() (in module nitime.utils)
FIR_estimate() (nitime.analysis.event_related.EventRelatedAnalyzer method)
fit_model() (in module nitime.analysis.granger)
freq_domain_xcorr() (in module nitime.algorithms.event_related)
freq_domain_xcorr_zscored() (in module nitime.algorithms.event_related)
freq_response() (in module nitime.algorithms.spectral)
frequencies() (nitime.analysis.coherence.CoherenceAnalyzer method)
(nitime.analysis.coherence.MTCoherenceAnalyzer method)
(nitime.analysis.coherence.SeedCoherenceAnalyzer method)
(nitime.analysis.coherence.SparseCoherenceAnalyzer method)
(nitime.analysis.granger.GrangerAnalyzer method)
Frequency (class in nitime.timeseries)
from_time_and_data() (nitime.timeseries.TimeSeries static method)
G
gamma_hrf() (in module nitime.fmri.hrf)
generate_mar() (in module nitime.utils)
get_bounds() (in module nitime.utils)
get_freqs() (in module nitime.utils)
get_spectra() (in module nitime.algorithms.spectral)
get_spectra_bi() (in module nitime.algorithms.spectral)
get_time_unit() (in module nitime.timeseries)
granger_causality_xy() (in module nitime.algorithms.autoregressive)
GrangerAnalyzer (class in nitime.analysis.granger)
H
hanning_window_spectrum() (in module nitime.utils)
HilbertAnalyzer (class in nitime.analysis.spectral)
histogram2d() (in module nitime.index_utils)
I
iir() (nitime.analysis.spectral.FilterAnalyzer method)
imag() (nitime.analysis.spectral.HilbertAnalyzer method)
(nitime.analysis.spectral.MorletWaveletAnalyzer method)
index_at() (nitime.timeseries.TimeArray method)
(nitime.timeseries.UniformTime method)
interdependence_xy() (in module nitime.algorithms.autoregressive)
intersect_coords() (in module nitime.utils)
J
jackknifed_coh_variance() (in module nitime.utils)
jackknifed_sdf_variance() (in module nitime.utils)
L
lab2node() (in module nitime.viz)
LazyImport (class in nitime.lazyimports)
lwr_recursion() (in module nitime.algorithms.autoregressive)
M
MAR_est_LWR() (in module nitime.algorithms.autoregressive)
mask_indices() (in module nitime.index_utils)
(in module nitime.utils)
matshow_tseries() (in module nitime.viz)
max() (nitime.timeseries.TimeArray method)
(nitime.timeseries.UniformTime method)
mean() (nitime.timeseries.TimeArray method)
metadata (nitime.timeseries.TimeSeriesInterface attribute)
min() (nitime.timeseries.TimeArray method)
(nitime.timeseries.UniformTime method)
minmax_norm() (in module nitime.utils)
mkgraph() (in module nitime.viz)
model_coef() (nitime.analysis.granger.GrangerAnalyzer method)
MorletWaveletAnalyzer (class in nitime.analysis.spectral)
mt_coherence() (nitime.analysis.snr.SNRAnalyzer method)
mt_frequencies() (nitime.analysis.snr.SNRAnalyzer method)
mt_information() (nitime.analysis.snr.SNRAnalyzer method)
mt_noise_psd() (nitime.analysis.snr.SNRAnalyzer method)
mt_signal_psd() (nitime.analysis.snr.SNRAnalyzer method)
mt_snr() (nitime.analysis.snr.SNRAnalyzer method)
MTCoherenceAnalyzer (class in nitime.analysis.coherence)
mtm_cross_spectrum() (in module nitime.algorithms.spectral)
multi_intersect() (in module nitime.utils)
multi_taper_csd() (in module nitime.algorithms.spectral)
multi_taper_psd() (in module nitime.algorithms.spectral)
mutual_information() (in module nitime.algorithms.entropy)
N
nifti_from_time_series() (in module nitime.fmri.io)
nitime.algorithms.autoregressive (module)
nitime.algorithms.cohere (module)
nitime.algorithms.correlation (module)
nitime.algorithms.entropy (module)
nitime.algorithms.event_related (module)
nitime.algorithms.filter (module)
nitime.algorithms.spectral (module)
nitime.algorithms.wavelet (module)
nitime.analysis.base (module)
nitime.analysis.coherence (module)
nitime.analysis.correlation (module)
nitime.analysis.event_related (module)
nitime.analysis.granger (module)
nitime.analysis.normalization (module)
nitime.analysis.snr (module)
nitime.analysis.spectral (module)
nitime.descriptors (module)
nitime.fmri.hrf (module)
nitime.fmri.io (module)
nitime.index_utils (module)
nitime.lazy (module)
nitime.lazyimports (module)
nitime.timeseries (module)
nitime.utils (module)
nitime.viz (module)
normal_coherence_to_unit() (in module nitime.utils)
NormalizationAnalyzer (class in nitime.analysis.normalization)
normalize_coherence() (in module nitime.utils)
O
OneTimeProperty (class in nitime.descriptors)
order() (nitime.analysis.granger.GrangerAnalyzer method)
P
parameterlist() (nitime.analysis.base.BaseAnalyzer method)
parameters (nitime.analysis.base.BaseAnalyzer attribute)
percent_change() (in module nitime.utils)
(nitime.analysis.normalization.NormalizationAnalyzer method)
periodogram() (in module nitime.algorithms.spectral)
(nitime.analysis.spectral.SpectralAnalyzer method)
periodogram_csd() (in module nitime.algorithms.spectral)
phase() (nitime.analysis.coherence.CoherenceAnalyzer method)
(nitime.analysis.spectral.HilbertAnalyzer method)
(nitime.analysis.spectral.MorletWaveletAnalyzer method)
phases() (nitime.analysis.coherence.SparseCoherenceAnalyzer method)
plot_corr_diff() (in module nitime.viz)
plot_snr() (in module nitime.viz)
plot_snr_diff() (in module nitime.viz)
plot_spectral_estimate() (in module nitime.viz)
plot_tseries() (in module nitime.viz)
plot_xcorr() (in module nitime.viz)
polonsky_hrf() (in module nitime.fmri.hrf)
prod() (nitime.timeseries.TimeArray method)
psd() (nitime.analysis.spectral.SpectralAnalyzer method)
ptp() (nitime.timeseries.TimeArray method)
R
real() (nitime.analysis.spectral.HilbertAnalyzer method)
(nitime.analysis.spectral.MorletWaveletAnalyzer method)
relative_phases() (nitime.analysis.coherence.SeedCoherenceAnalyzer method)
(nitime.analysis.coherence.SparseCoherenceAnalyzer method)
remove_bias() (in module nitime.utils)
rescale_arr() (in module nitime.utils)
reset() (nitime.descriptors.ResetMixin method)
ResetMixin (class in nitime.descriptors)
rgb_to_dict() (in module nitime.viz)
S
seed_corrcoef() (in module nitime.algorithms.correlation)
SeedCoherenceAnalyzer (class in nitime.analysis.coherence)
SeedCorrelationAnalyzer (class in nitime.analysis.correlation)
set_input() (nitime.analysis.base.BaseAnalyzer method)
shape (nitime.timeseries.TimeSeries attribute)
signal_noise() (in module nitime.analysis.snr)
simultaneous_causality() (nitime.analysis.granger.GrangerAnalyzer method)
slice_during() (nitime.timeseries.TimeArray method)
(nitime.timeseries.UniformTime method)
SNRAnalyzer (class in nitime.analysis.snr)
SparseCoherenceAnalyzer (class in nitime.analysis.coherence)
spectra() (nitime.analysis.coherence.MTCoherenceAnalyzer method)
spectral_matrix() (nitime.analysis.granger.GrangerAnalyzer method)
spectral_matrix_xy() (in module nitime.algorithms.autoregressive)
SpectralAnalyzer (class in nitime.analysis.spectral)
spectrum() (nitime.analysis.coherence.CoherenceAnalyzer method)
(nitime.analysis.coherence.SparseCoherenceAnalyzer method)
spectrum_fourier() (nitime.analysis.spectral.SpectralAnalyzer method)
spectrum_multi_taper() (nitime.analysis.spectral.SpectralAnalyzer method)
square_window_spectrum() (in module nitime.utils)
start (nitime.timeseries.Epochs attribute)
std() (nitime.timeseries.TimeArray method)
stop (nitime.timeseries.Epochs attribute)
str_tspec() (in module nitime.timeseries)
str_valid_tspecs() (in module nitime.timeseries)
structured_rand_arr() (in module nitime.utils)
subcolormap() (in module nitime.viz)
sum() (nitime.timeseries.TimeArray method)
symm_rand_arr() (in module nitime.utils)
T
tapered_spectra() (in module nitime.algorithms.spectral)
tapers() (nitime.analysis.coherence.MTCoherenceAnalyzer method)
target_cache() (nitime.analysis.coherence.SeedCoherenceAnalyzer method)
threshold_arr() (in module nitime.utils)
thresholded_arr() (in module nitime.utils)
time (nitime.timeseries.TimeSeriesInterface attribute)
time() (nitime.timeseries.TimeSeries method)
time_series_from_file() (in module nitime.fmri.io)
time_unit (nitime.timeseries.TimeInterface attribute)
TimeArray (class in nitime.timeseries)
TimeInterface (class in nitime.timeseries)
TimeSeries (class in nitime.timeseries)
TimeSeriesBase (class in nitime.timeseries)
TimeSeriesInterface (class in nitime.timeseries)
to_period() (nitime.timeseries.Frequency method)
transfer_entropy() (in module nitime.algorithms.entropy)
transfer_function_xy() (in module nitime.algorithms.autoregressive)
tri() (in module nitime.index_utils)
tridi_inverse_iteration() (in module nitime.utils)
tril() (in module nitime.index_utils)
tril_indices() (in module nitime.index_utils)
(in module nitime.utils)
tril_indices_from() (in module nitime.index_utils)
(in module nitime.utils)
triu() (in module nitime.index_utils)
triu_indices() (in module nitime.index_utils)
(in module nitime.utils)
triu_indices_from() (in module nitime.index_utils)
(in module nitime.utils)
U
UniformTime (class in nitime.timeseries)
unwrap_phases() (in module nitime.utils)
V
vander() (in module nitime.index_utils)
var() (nitime.timeseries.TimeArray method)
W
weights() (nitime.analysis.coherence.MTCoherenceAnalyzer method)
wfmorlet_fft() (in module nitime.algorithms.wavelet)
winspect() (in module nitime.viz)
wlogmorlet() (in module nitime.algorithms.wavelet)
wlogmorlet_fft() (in module nitime.algorithms.wavelet)
wmorlet() (in module nitime.algorithms.wavelet)
X
xcorr() (nitime.analysis.correlation.CorrelationAnalyzer method)
xcorr_eta() (nitime.analysis.event_related.EventRelatedAnalyzer method)
xcorr_norm() (nitime.analysis.correlation.CorrelationAnalyzer method)
Z
z_score() (nitime.analysis.normalization.NormalizationAnalyzer method)
zero_pad() (in module nitime.utils)
zscore() (in module nitime.utils)
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