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EGHTraceFitter< PeakType > Member List

This is the complete list of members for EGHTraceFitter< PeakType >, including all inherited members.

apex_rt_EGHTraceFitter< PeakType >protected
check_defaults_DefaultParamHandlerprotected
checkMaximalRTSpan(const DoubleReal max_rt_span)EGHTraceFitter< PeakType >inlinevirtual
checkMinimalRTSpan(const std::pair< DoubleReal, DoubleReal > &rt_bounds, const DoubleReal min_rt_span)EGHTraceFitter< PeakType >inlinevirtual
computeTheoretical(const FeatureFinderAlgorithmPickedHelperStructs::MassTrace< PeakType > &trace, Size k)EGHTraceFitter< PeakType >inlinevirtual
DefaultParamHandler(const String &name)DefaultParamHandler
DefaultParamHandler(const DefaultParamHandler &rhs)DefaultParamHandler
defaults_DefaultParamHandlerprotected
defaultsToParam_()DefaultParamHandlerprotected
EGHTraceFitter()EGHTraceFitter< PeakType >inline
EGHTraceFitter(const EGHTraceFitter &other)EGHTraceFitter< PeakType >inline
epsilon_abs_TraceFitter< PeakType >protected
epsilon_rel_TraceFitter< PeakType >protected
error_name_DefaultParamHandlerprotected
evaluate_(const gsl_vector *param, void *data, gsl_vector *f, gsl_matrix *J)EGHTraceFitter< PeakType >inlineprotectedstatic
fit(FeatureFinderAlgorithmPickedHelperStructs::MassTraces< PeakType > &traces)EGHTraceFitter< PeakType >inlinevirtual
fwhm_bound_EGHTraceFitter< PeakType >protected
getAlphaBoundaries_(const DoubleReal alpha) const EGHTraceFitter< PeakType >inlineprotected
getCenter() const EGHTraceFitter< PeakType >inlinevirtual
getDefaults() const DefaultParamHandler
getFeatureIntensityContribution()EGHTraceFitter< PeakType >inlinevirtual
getFWHM() const EGHTraceFitter< PeakType >inlinevirtual
getGnuplotFormula(FeatureFinderAlgorithmPickedHelperStructs::MassTrace< PeakType > const &trace, const char function_name, const DoubleReal baseline, const DoubleReal rt_shift)EGHTraceFitter< PeakType >inlinevirtual
getHeight() const EGHTraceFitter< PeakType >inlinevirtual
getLowerRTBound() const EGHTraceFitter< PeakType >inlinevirtual
getName() const DefaultParamHandler
getOptimizedParameters_(gsl_multifit_fdfsolver *fdfsolver)EGHTraceFitter< PeakType >inlineprotectedvirtual
getParameters() const DefaultParamHandler
getSigmaSquare() const EGHTraceFitter< PeakType >inline
getSubsections() const DefaultParamHandler
getTau() const EGHTraceFitter< PeakType >inline
getUpperRTBound() const EGHTraceFitter< PeakType >inlinevirtual
height_EGHTraceFitter< PeakType >protected
jacobian_(const gsl_vector *param, void *data, gsl_matrix *J)EGHTraceFitter< PeakType >inlineprotectedstatic
max_iterations_TraceFitter< PeakType >protected
NUM_PARAMS_EGHTraceFitter< PeakType >protectedstatic
operator=(const EGHTraceFitter &source)EGHTraceFitter< PeakType >inline
OpenMS::TraceFitter::operator=(const TraceFitter &source)TraceFitter< PeakType >inlinevirtual
OpenMS::DefaultParamHandler::operator=(const DefaultParamHandler &rhs)DefaultParamHandlervirtual
operator==(const DefaultParamHandler &rhs) const DefaultParamHandlervirtual
optimize_(FeatureFinderAlgorithmPickedHelperStructs::MassTraces< PeakType > &traces, const Size num_params, double x_init[], Int(*residual)(const gsl_vector *x, void *params, gsl_vector *f), Int(*jacobian)(const gsl_vector *x, void *params, gsl_matrix *J), Int(*evaluate)(const gsl_vector *x, void *params, gsl_vector *f, gsl_matrix *J))TraceFitter< PeakType >inlineprotected
param_DefaultParamHandlerprotected
printState_(SignedSize iter, gsl_multifit_fdfsolver *s)EGHTraceFitter< PeakType >inlineprotectedvirtual
region_rt_span_EGHTraceFitter< PeakType >protected
residual_(const gsl_vector *param, void *data, gsl_vector *f)EGHTraceFitter< PeakType >inlineprotectedstatic
setInitialParameters_(FeatureFinderAlgorithmPickedHelperStructs::MassTraces< PeakType > &traces)EGHTraceFitter< PeakType >inlineprotected
setName(const String &name)DefaultParamHandler
setParameters(const Param &param)DefaultParamHandler
sigma_5_bound_EGHTraceFitter< PeakType >protected
sigma_square_EGHTraceFitter< PeakType >protected
subsections_DefaultParamHandlerprotected
tau_EGHTraceFitter< PeakType >protected
TraceFitter()TraceFitter< PeakType >inline
TraceFitter(const TraceFitter &source)TraceFitter< PeakType >inline
updateMembers_()EGHTraceFitter< PeakType >inlineprotectedvirtual
warn_empty_defaults_DefaultParamHandlerprotected
~DefaultParamHandler()DefaultParamHandlervirtual
~EGHTraceFitter()EGHTraceFitter< PeakType >inlinevirtual
~TraceFitter()TraceFitter< PeakType >inlinevirtual

OpenMS / TOPP release 1.11.1 Documentation generated on Thu Nov 14 2013 11:19:34 using doxygen 1.8.5