35 #ifndef OPENMS_ANALYSIS_OPENSWATH_OPENSWATHALGO_DATAACCESS_TRANSITIONEXPERIMENT_H
36 #define OPENMS_ANALYSIS_OPENSWATH_OPENSWATHALGO_DATAACCESS_TRANSITIONEXPERIMENT_H
40 #include <boost/shared_ptr.hpp>
42 #include <OpenMS/ANALYSIS/OPENSWATH/OPENSWATHALGO/OpenSwathAlgoConfig.h>
63 return transition_name;
73 return library_intensity;
78 library_intensity = l;
146 #endif // OPENMS_ANALYSIS_OPENSWATH_OPENSWATHALGO_DATAACCESS_TRANSITIONEXPERIMENT_H
std::string getPeptideRef() const
Definition: TransitionExperiment.h:66
std::vector< LightProtein > & getProteins()
Definition: TransitionExperiment.h:135
double product_mz
Definition: TransitionExperiment.h:52
std::string id
Definition: TransitionExperiment.h:116
double library_intensity
Definition: TransitionExperiment.h:51
std::vector< LightTransition > transitions
Definition: TransitionExperiment.h:122
int getChargeState() const
Definition: TransitionExperiment.h:106
std::vector< LightProtein > proteins
Definition: TransitionExperiment.h:124
int getProductChargeState() const
Definition: TransitionExperiment.h:56
std::string getNativeID() const
Definition: TransitionExperiment.h:61
int charge
Definition: TransitionExperiment.h:102
double precursor_mz
Definition: TransitionExperiment.h:53
std::string protein_ref
Definition: TransitionExperiment.h:104
double getPrecursorMZ() const
Definition: TransitionExperiment.h:86
std::vector< LightPeptide > peptides
Definition: TransitionExperiment.h:123
void setLibraryIntensity(double l)
Definition: TransitionExperiment.h:76
Definition: TransitionExperiment.h:99
std::string sequence
Definition: TransitionExperiment.h:117
double getProductMZ() const
Definition: TransitionExperiment.h:81
int location
Definition: TransitionExperiment.h:95
std::vector< LightTransition > & getTransitions()
Definition: TransitionExperiment.h:125
std::string transition_name
Definition: TransitionExperiment.h:49
std::string id
Definition: TransitionExperiment.h:105
std::string peptide_ref
Definition: TransitionExperiment.h:50
std::string unimod_id
Definition: TransitionExperiment.h:96
Definition: TransitionExperiment.h:46
std::vector< LightPeptide > & getPeptides()
Definition: TransitionExperiment.h:130
int charge
Definition: TransitionExperiment.h:54
double rt
Definition: TransitionExperiment.h:101
Definition: TransitionExperiment.h:114
double getLibraryIntensity() const
Definition: TransitionExperiment.h:71
Definition: TransitionExperiment.h:120
std::string sequence
Definition: TransitionExperiment.h:103
std::vector< LightModification > modifications
Definition: TransitionExperiment.h:111
Definition: TransitionExperiment.h:93