35 #ifndef OPENMS_TRANSFORMATIONS_FEATUREFINDER_FEATUREFINDER_H
36 #define OPENMS_TRANSFORMATIONS_FEATUREFINDER_FEATUREFINDER_H
87 template <
class PeakType,
class FeatureType>
93 return flags_[index.first][index.second];
99 return flags_[index.first][index.second];
103 Param getParameters(
const String & algorithm_name)
const;
114 #endif // OPENMS_TRANSFORMATIONS_FEATUREFINDER_FEATUREFINDER_H
IsotopeCluster::IndexPair IndexPair
Index to peak consisting of two UInts (scan index / peak index)
Definition: FeatureFinderDefs.h:54
A more convenient string class.
Definition: String.h:56
A container for features.
Definition: FeatureMap.h:111
The purpose of this struct is to provide definitions of classes and typedefs which are used throughou...
Definition: FeatureFinderDefs.h:51
Management and storage of parameters / INI files.
Definition: Param.h:69
Representation of a mass spectrometry experiment.
Definition: MSExperiment.h:68
Flag & getPeakFlag(const IndexPair &index)
Returns mutable reference to a peak flag.
Definition: FeatureFinder.h:97
std::vector< std::vector< Flag > > flags_
Container for flags attached to input data.
Definition: FeatureFinder.h:108
Base class for all classes that want to report their progess.
Definition: ProgressLogger.h:56
The main feature finder class.
Definition: FeatureFinder.h:57
const Flag & getPeakFlag(const IndexPair &index) const
Returns a non-mutable reference to a peak flag.
Definition: FeatureFinder.h:91