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Transitions.h
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34 
35 #ifndef OPENMS_ANALYSIS_OPENSWATH_OPENSWATHALGO_DATAACCESS_TRANSITIONS_H
36 #define OPENMS_ANALYSIS_OPENSWATH_OPENSWATHALGO_DATAACCESS_TRANSITIONS_H
37 
38 namespace OpenSwath
39 {
40 
41  struct OPENSWATHALGO_DLLAPI Peptide
42  {
43  double rt;
44  int charge;
45  std::string sequence;
46  std::string id;
47  int getChargeState() const
48  {
49  return charge;
50  }
51 
52  std::vector<LightModification> modifications;
53  std::vector<LightTransition> transitions;
54  };
55 
56  struct OPENSWATHALGO_DLLAPI Protein
57  {
58  std::string id;
59  std::string sequence;
60  std::vector<Peptide> peptides;
61  };
62 
63  struct OPENSWATHALGO_DLLAPI TargetedExperiment
64  {
65  std::vector<Protein> proteins;
66  };
67 
68 }
69 
70 #endif // OPENMS_ANALYSIS_OPENSWATH_OPENSWATHALGO_DATAACCESS_TRANSITIONS_H
std::vector< LightModification > modifications
Definition: Transitions.h:52
std::vector< Peptide > peptides
Definition: Transitions.h:60
Definition: Transitions.h:41
double rt
Definition: Transitions.h:43
std::vector< LightTransition > transitions
Definition: Transitions.h:53
std::vector< Protein > proteins
Definition: Transitions.h:65
std::string sequence
Definition: Transitions.h:59
Definition: Transitions.h:56
int getChargeState() const
Definition: Transitions.h:47
std::string id
Definition: Transitions.h:58
std::string id
Definition: Transitions.h:46
std::string sequence
Definition: Transitions.h:45
int charge
Definition: Transitions.h:44
Definition: Transitions.h:63

OpenMS / TOPP release 1.11.1 Documentation generated on Thu Nov 14 2013 11:19:22 using doxygen 1.8.5