This is the complete list of members for AASequence, including all inherited members.
AASequence() | AASequence | |
AASequence(const AASequence &rhs) | AASequence | |
AASequence(const String &rhs) | AASequence | |
AASequence(const char *rhs) | AASequence | |
begin() | AASequence | inline |
begin() const | AASequence | inline |
c_term_mod_ | AASequence | protected |
empty() const | AASequence | |
end() | AASequence | inline |
end() const | AASequence | inline |
getAAFrequencies(Map< String, Size > &frequency_table) const | AASequence | |
getAverageWeight(Residue::ResidueType type=Residue::Full, Int charge=0) const | AASequence | |
getCTerminalModification() const | AASequence | |
getFormula(Residue::ResidueType type=Residue::Full, Int charge=0) const | AASequence | |
getMonoWeight(Residue::ResidueType type=Residue::Full, Int charge=0) const | AASequence | |
getNTerminalModification() const | AASequence | |
getNumberOf(const String &residue) const | AASequence | |
getPrefix(Size index) const | AASequence | |
getResidue(SignedSize index) const | AASequence | |
getResidue(Size index) const | AASequence | |
getResidueDB_() const | AASequence | protected |
getSubsequence(Size index, UInt number) const | AASequence | |
getSuffix(Size index) const | AASequence | |
has(const Residue &residue) const | AASequence | |
has(const String &name) const | AASequence | |
hasCTerminalModification() const | AASequence | |
hasNTerminalModification() const | AASequence | |
hasPrefix(const AASequence &peptide) const | AASequence | |
hasPrefix(const String &peptide) const | AASequence | |
hasSubsequence(const AASequence &peptide) const | AASequence | |
hasSubsequence(const String &peptide) const | AASequence | |
hasSuffix(const AASequence &peptide) const | AASequence | |
hasSuffix(const String &peptide) const | AASequence | |
isModified() const | AASequence | |
isModified(Size index) const | AASequence | |
isValid() const | AASequence | |
n_term_mod_ | AASequence | protected |
operator!=(const AASequence &rhs) const | AASequence | |
operator!=(const String &rhs) const | AASequence | |
operator!=(const char *rhs) const | AASequence | |
operator+(const AASequence &peptide) const | AASequence | |
operator+(const String &peptide) const | AASequence | |
operator+(const char *rhs) const | AASequence | |
operator+(const Residue *residue) const | AASequence | |
operator+=(const AASequence &) | AASequence | |
operator+=(const String &) | AASequence | |
operator+=(const char *rhs) | AASequence | |
operator+=(const Residue *residue) | AASequence | |
operator<(const AASequence &rhs) const | AASequence | |
operator<<(std::ostream &os, const AASequence &peptide) | AASequence | friend |
operator=(const AASequence &rhs) | AASequence | |
operator==(const AASequence &rhs) const | AASequence | |
operator==(const String &rhs) const | AASequence | |
operator==(const char *rhs) const | AASequence | |
operator>>(std::istream &is, const AASequence &peptide) | AASequence | friend |
operator[](SignedSize index) const | AASequence | |
operator[](Size index) const | AASequence | |
parseString_(std::vector< const Residue * > &sequence, const String &peptide) | AASequence | protected |
peptide_ | AASequence | protected |
sequence_string_ | AASequence | protected |
setCTerminalModification(const String &modification) | AASequence | |
setModification(Size index, const String &modification) | AASequence | |
setNTerminalModification(const String &modification) | AASequence | |
setStringSequence(const String &sequence) | AASequence | |
size() const | AASequence | |
toString() const | AASequence | |
toUnmodifiedString() const | AASequence | |
valid_ | AASequence | protected |
~AASequence() | AASequence | virtual |
OpenMS / TOPP release 1.11.1 | Documentation generated on Thu Nov 14 2013 11:19:27 using doxygen 1.8.5 |