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SimpleExtender< PeakType, FeatureType > Member List

This is the complete list of members for SimpleExtender< PeakType, FeatureType >, including all inherited members.

addConvexHull(const FeatureFinderDefs::IndexSet &set, Feature &feature) const FeaFiModule< PeakType, FeatureType >inline
Base typedefSimpleExtender< PeakType, FeatureType >
boundary_SimpleExtender< PeakType, FeatureType >protected
ChargedIndexSet typedefFeatureFinderDefs
check_defaults_DefaultParamHandlerprotected
checkNeighbour_(const IndexPair &index)SimpleExtender< PeakType, FeatureType >inlineprotected
computePeakPriority_(const IndexPair &index)SimpleExtender< PeakType, FeatureType >inlineprotected
CoordinateType typedefSimpleExtender< PeakType, FeatureType >
DefaultParamHandler(const String &name)DefaultParamHandler
DefaultParamHandler(const DefaultParamHandler &rhs)DefaultParamHandler
defaults_DefaultParamHandlerprotected
defaultsToParam_()DefaultParamHandlerprotected
dist_mz_down_SimpleExtender< PeakType, FeatureType >protected
dist_mz_up_SimpleExtender< PeakType, FeatureType >protected
dist_rt_down_SimpleExtender< PeakType, FeatureType >protected
dist_rt_up_SimpleExtender< PeakType, FeatureType >protected
error_name_DefaultParamHandlerprotected
extend(const ChargedIndexSet &seed_region, ChargedIndexSet &result_region)SimpleExtender< PeakType, FeatureType >inline
FeaFiModule(const MSExperiment< PeakType > *map, FeatureMap< FeatureType > *features, FeatureFinder *ff)FeaFiModule< PeakType, FeatureType >inline
FeatureMapType typedefFeaFiModule< PeakType, FeatureType >
features_FeaFiModule< PeakType, FeatureType >protected
ff_FeaFiModule< PeakType, FeatureType >protected
Flag enum nameFeatureFinderDefs
getDefaults() const DefaultParamHandler
getName() const DefaultParamHandler
getNextMz(FeatureFinderDefs::IndexPair &index) const FeaFiModule< PeakType, FeatureType >inline
getNextRt(FeatureFinderDefs::IndexPair &index)FeaFiModule< PeakType, FeatureType >inline
getParameters() const DefaultParamHandler
getPeakIntensity(const FeatureFinderDefs::IndexPair &index) const FeaFiModule< PeakType, FeatureType >inline
getPeakMz(const FeatureFinderDefs::IndexPair &index) const FeaFiModule< PeakType, FeatureType >inline
getPeakRt(const FeatureFinderDefs::IndexPair &index) const FeaFiModule< PeakType, FeatureType >inline
getPrevMz(FeatureFinderDefs::IndexPair &index) const FeaFiModule< PeakType, FeatureType >inline
getPrevRt(FeatureFinderDefs::IndexPair &index)FeaFiModule< PeakType, FeatureType >inline
getSubsections() const DefaultParamHandler
IndexPair typedefFeatureFinderDefs
IndexSet typedefFeatureFinderDefs
intensity_threshold_SimpleExtender< PeakType, FeatureType >protected
IntensityType typedefSimpleExtender< PeakType, FeatureType >
isTooFarFromCentroid_(const IndexPair &index)SimpleExtender< PeakType, FeatureType >inlineprotected
last_pos_extracted_SimpleExtender< PeakType, FeatureType >protected
map_FeaFiModule< PeakType, FeatureType >protected
MapType typedefFeaFiModule< PeakType, FeatureType >
moveMzDown_(const IndexPair &index)SimpleExtender< PeakType, FeatureType >inlineprotected
moveMzUp_(const IndexPair &index)SimpleExtender< PeakType, FeatureType >inlineprotected
moveRtDown_(const IndexPair &index)SimpleExtender< PeakType, FeatureType >inlineprotected
moveRtUp_(const IndexPair &index)SimpleExtender< PeakType, FeatureType >inlineprotected
operator=(const SimpleExtender &)SimpleExtender< PeakType, FeatureType >private
OpenMS::DefaultParamHandler::operator=(const DefaultParamHandler &rhs)DefaultParamHandlervirtual
operator==(const DefaultParamHandler &rhs) const DefaultParamHandlervirtual
param_DefaultParamHandlerprotected
priorities_SimpleExtender< PeakType, FeatureType >protected
priority_threshold_SimpleExtender< PeakType, FeatureType >protected
ProbabilityType typedefSimpleExtender< PeakType, FeatureType >
region_SimpleExtender< PeakType, FeatureType >protected
running_avg_SimpleExtender< PeakType, FeatureType >protected
setName(const String &name)DefaultParamHandler
setParameters(const Param &param)DefaultParamHandler
SimpleExtender(const MSExperiment< PeakType > *map, FeatureMap< FeatureType > *features, FeatureFinder *ff)SimpleExtender< PeakType, FeatureType >inline
SimpleExtender()SimpleExtender< PeakType, FeatureType >private
SimpleExtender(const SimpleExtender &)SimpleExtender< PeakType, FeatureType >private
SpectrumType typedefFeaFiModule< PeakType, FeatureType >
subsections_DefaultParamHandlerprotected
UNUSED enum valueFeatureFinderDefs
updateMembers_()SimpleExtender< PeakType, FeatureType >inlineprotectedvirtual
USED enum valueFeatureFinderDefs
warn_empty_defaults_DefaultParamHandlerprotected
writeDebugFile_(const std::vector< IndexPair > &peaks, UInt nr_feat)SimpleExtender< PeakType, FeatureType >inlineprotected
~DefaultParamHandler()DefaultParamHandlervirtual
~FeaFiModule()FeaFiModule< PeakType, FeatureType >inlinevirtual
~SimpleExtender()SimpleExtender< PeakType, FeatureType >inlinevirtual

OpenMS / TOPP release 1.11.1 Documentation generated on Thu Nov 14 2013 11:19:34 using doxygen 1.8.5