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BackgroundControl.h
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5 // ETH Zurich, and Freie Universitaet Berlin 2002-2013.
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31 // $Maintainer: Florian Zeller $
32 // $Authors: Lukas Mueller, Markus Mueller $
33 // --------------------------------------------------------------------------
34 //
36 //
37 // PEAK DETECTION OF FOURIER TRANSFORME MS INSTRUMENT DATA
38 //
39 // written by Markus Mueller, markus.mueller@imsb.biol.ethz.ch
40 // ( and Lukas Mueller, Lukas.Mueller@imsb.biol.ethz.ch)
41 // October 2005
42 //
43 // Ported to OpenMS by Florian Zeller, florian.zeller@bsse.ethz.ch
44 // December 2010
45 //
46 // Group of Prof. Ruedi Aebersold, IMSB, ETH Hoenggerberg, Zurich
47 //
48 //
49 
50 #ifndef OPENMS_TRANSFORMATIONS_FEATUREFINDER_SUPERHIRN_BACKGROUNDCONTROL_H
51 #define OPENMS_TRANSFORMATIONS_FEATUREFINDER_SUPERHIRN_BACKGROUNDCONTROL_H
52 
53 namespace OpenMS
54 {
55 
56  class OPENMS_DLLAPI BackgroundControl
57  {
58 
59 private:
60 
61  std::map<double, std::map<double, BackgroundIntensityBin> > intensityBinMap;
62 
63  void init();
64 
65 public:
66 
68 
70 
71  void addPeakMSScan(double, std::list<CentroidPeak> * peakList);
72 
73  double getBackgroundLevel(double mz, double tr);
74 
75  // find a key in the intensity map:
76  std::map<double, std::map<double, BackgroundIntensityBin> >::iterator findTrKey(double);
77 
78  // find a key in the m/z map:
79  std::map<double, BackgroundIntensityBin>::iterator findMzKey(double mz, std::map<double, BackgroundIntensityBin> *);
80 
81  void processIntensityMaps();
82 
83  // overload operators:
84  bool operator==(const BackgroundControl &);
85  BackgroundControl & operator<=(const BackgroundControl &);
86  BackgroundControl & operator>=(const BackgroundControl &);
87  BackgroundControl & operator<(const BackgroundControl &);
88  BackgroundControl & operator>(const BackgroundControl &);
89 
90  };
91 
92 } // namespace
93 
94 #endif // OPENMS_TRANSFORMATIONS_FEATUREFINDER_SUPERHIRN_BACKGROUNDCONTROL_H
Definition: BackgroundControl.h:56
std::map< double, std::map< double, BackgroundIntensityBin > > intensityBinMap
Definition: BackgroundControl.h:61

OpenMS / TOPP release 1.11.1 Documentation generated on Thu Nov 14 2013 11:19:11 using doxygen 1.8.5