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OpenMS
PeptideIdentification
PeptideIdentification Member List
This is the complete list of members for
PeptideIdentification
, including all inherited members.
assignRanks
()
PeptideIdentification
clearMetaInfo
()
MetaInfoInterface
createIfNotExists_
()
MetaInfoInterface
inline
protected
empty
() const
PeptideIdentification
getHits
() const
PeptideIdentification
getIdentifier
() const
PeptideIdentification
getKeys
(std::vector< String > &keys) const
MetaInfoInterface
getKeys
(std::vector< UInt > &keys) const
MetaInfoInterface
getMetaValue
(const String &name) const
MetaInfoInterface
getMetaValue
(UInt index) const
MetaInfoInterface
getNonReferencingHits
(const String &protein_accession, std::vector< PeptideHit > &peptide_hits) const
PeptideIdentification
getNonReferencingHits
(const std::vector< String > &accessions, std::vector< PeptideHit > &peptide_hits) const
PeptideIdentification
getNonReferencingHits
(const std::vector< ProteinHit > &protein_hits, std::vector< PeptideHit > &peptide_hits) const
PeptideIdentification
getReferencingHits
(const String &protein_accession, std::vector< PeptideHit > &peptide_hits) const
PeptideIdentification
getReferencingHits
(const std::vector< String > &accessions, std::vector< PeptideHit > &peptide_hits) const
PeptideIdentification
getReferencingHits
(const std::vector< ProteinHit > &protein_hits, std::vector< PeptideHit > &peptide_hits) const
PeptideIdentification
getScoreType
() const
PeptideIdentification
getSignificanceThreshold
() const
PeptideIdentification
higher_score_better_
PeptideIdentification
protected
hits_
PeptideIdentification
protected
HitType
typedef
PeptideIdentification
id_
PeptideIdentification
protected
insertHit
(const PeptideHit &hit)
PeptideIdentification
isHigherScoreBetter
() const
PeptideIdentification
isMetaEmpty
() const
MetaInfoInterface
meta_
MetaInfoInterface
protected
MetaInfoInterface
()
MetaInfoInterface
MetaInfoInterface
(const MetaInfoInterface &rhs)
MetaInfoInterface
metaRegistry
()
MetaInfoInterface
static
metaValueExists
(const String &name) const
MetaInfoInterface
metaValueExists
(UInt index) const
MetaInfoInterface
operator!=
(const PeptideIdentification &rhs) const
PeptideIdentification
OpenMS::MetaInfoInterface::operator!=
(const MetaInfoInterface &rhs) const
MetaInfoInterface
operator=
(const PeptideIdentification &source)
PeptideIdentification
OpenMS::MetaInfoInterface::operator=
(const MetaInfoInterface &rhs)
MetaInfoInterface
operator==
(const PeptideIdentification &rhs) const
PeptideIdentification
OpenMS::MetaInfoInterface::operator==
(const MetaInfoInterface &rhs) const
MetaInfoInterface
PeptideIdentification
()
PeptideIdentification
PeptideIdentification
(const PeptideIdentification &source)
PeptideIdentification
removeMetaValue
(const String &name)
MetaInfoInterface
removeMetaValue
(UInt index)
MetaInfoInterface
score_type_
PeptideIdentification
protected
setHigherScoreBetter
(bool value)
PeptideIdentification
setHits
(const std::vector< PeptideHit > &hits)
PeptideIdentification
setIdentifier
(const String &id)
PeptideIdentification
setMetaValue
(const String &name, const DataValue &value)
MetaInfoInterface
setMetaValue
(UInt index, const DataValue &value)
MetaInfoInterface
setScoreType
(const String &type)
PeptideIdentification
setSignificanceThreshold
(DoubleReal value)
PeptideIdentification
significance_threshold_
PeptideIdentification
protected
sort
()
PeptideIdentification
~MetaInfoInterface
()
MetaInfoInterface
~PeptideIdentification
()
PeptideIdentification
virtual
OpenMS / TOPP release 1.11.1
Documentation generated on Thu Nov 14 2013 11:19:33 using doxygen 1.8.5