35 #ifndef OPENMS_ANALYSIS_MAPMATCHING_STABLEPAIRFINDER_H
36 #define OPENMS_ANALYSIS_MAPMATCHING_STABLEPAIRFINDER_H
142 void run(
const std::vector<ConsensusMap>& input_maps,
157 virtual void updateMembers_();
185 #endif // OPENMS_ANALYSIS_MAPMATCHING_STABLEPAIRFINDER_H
This class implements a pair finding algorithm for consensus features.
Definition: StablePairFinder.h:107
A more convenient string class.
Definition: String.h:56
Retention time dimension id (0 if used as a const int)
Definition: Peak2D.h:76
A container for consensus elements.
Definition: ConsensusMap.h:60
Mass-to-charge dimension id (1 if used as a const int)
Definition: Peak2D.h:77
Representation of a peptide/protein sequence.
Definition: AASequence.h:84
The base class of all element group finding algorithms.
Definition: BaseGroupFinder.h:59
bool use_IDs_
Only match if peptide IDs are compatible?
Definition: StablePairFinder.h:173
virtual ~StablePairFinder()
Destructor.
Definition: StablePairFinder.h:119
BaseGroupFinder Base
Base class.
Definition: StablePairFinder.h:113
DoubleReal second_nearest_gap_
The distance to the second nearest neighbors must be by this factor larger than the distance to the m...
Definition: StablePairFinder.h:170
static BaseGroupFinder * create()
Returns an instance of this class.
Definition: StablePairFinder.h:124
static const String getProductName()
Returns the name of this module.
Definition: StablePairFinder.h:130
A 2-dimensional consensus feature.
Definition: ConsensusFeature.h:59
Represents the peptide hits for a spectrum.
Definition: PeptideIdentification.h:63